STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF4Protein YIPF. (244 aa)    
Predicted Functional Partners:
YIPF3
Yip1 domain family member 3.
   
 
 0.957
YIPF2
Protein YIPF.
   
 
 0.939
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.788
YIPF1
Protein YIPF.
   
 
 0.668
ZFPL1
Zinc finger protein like 1.
   
  
 0.570
RPAP1
RNA polymerase II associated protein 1.
      
 0.549
TMED1
Transmembrane p24 trafficking protein 1.
   
 
 0.543
SLC66A3
Solute carrier family 66 member 3.
      
 0.489
RABAC1
PRA1 family protein.
   
 
 0.487
KDELR1
ER lumen protein-retaining receptor.
   
  
 0.484
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.