STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC28BCoiled-coil domain containing 28B. (200 aa)    
Predicted Functional Partners:
SLX1A
GIY-YIG domain-containing protein.
      
 0.697
CACHD1
Cache domain containing 1.
      
 0.648
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 
 0.618
BBS4
Bardet-Biedl syndrome 4.
    
 
 0.616
CWC27
CWC27 spliceosome associated cyclophilin.
      
 0.595
CEP85
Centrosomal protein 85.
      
 0.594
SLC45A1
Solute carrier family 45 member 1.
      
 0.591
RASL10B
RAS like family 10 member B.
      
 0.569
IQCC
IQ motif containing C.
 
      0.554
PHF21A
PHD finger protein 21A.
      
 0.549
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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