STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBX1Developing brain homeobox 1. (345 aa)    
Predicted Functional Partners:
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.747
EMX1
Empty spiracles homeobox 1.
    
 
 0.705
LHX2
LIM homeobox 2.
    
 
 0.685
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
  
 0.668
ATOH1
Atonal bHLH transcription factor 1.
   
  
 0.647
SIM1
SIM bHLH transcription factor 1.
   
  
 0.634
LHX5
LIM homeobox 5.
   
 
 0.627
LHX9
LIM homeobox 9.
    
 
 0.622
EVX1
Even-skipped homeobox 1 (Predicted).
   
 
0.608
PHOX2B
Homeobox domain-containing protein.
   
  
 0.598
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.