STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM35Tripartite motif containing 35. (493 aa)    
Predicted Functional Partners:
TRIM45
Tripartite motif containing 45.
     
 0.704
TRIM44
Tripartite motif containing 44.
    
 
 0.677
TRIM32
Tripartite motif containing 32.
    
0.672
TRIM14
Tripartite motif containing 14.
   
 0.586
RNF111
Ring finger protein 111.
   
 
 0.505
TRIM66
Tripartite motif containing 66.
      
 0.497
TRIM37
Tripartite motif containing 37.
    
 
 0.488
TRIM36
Tripartite motif containing 36.
   
  
 0.483
PKP2
Plakophilin 2.
    
 
 0.459
TRIM55
Tripartite motif containing 55.
    
 
 0.447
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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