STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD6Sushi domain containing 6. (303 aa)    
Predicted Functional Partners:
PRELID3A
PRELI domain containing 3A.
      
 0.700
MANSC1
MANSC domain containing 1.
    
 0.679
C3orf62
Chromosome 3 open reading frame 62.
      
 0.679
KLHL14
Kelch like family member 14.
      
 0.644
RNF24
Ring finger protein 24.
   
  
 0.598
TMCC3
Transmembrane and coiled-coil domain family 3.
      
 0.567
REPS2
RALBP1 associated Eps domain containing 2.
   
  
 0.551
DHX34
DExH-box helicase 34.
   
  
 0.548
ROPN1L
Rhophilin associated tail protein 1 like.
      
 0.547
PELI2
E3 ubiquitin-protein ligase pellino homolog; E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
   
  
 0.545
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.