STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC3Transmembrane channel-like protein. (1093 aa)    
Predicted Functional Partners:
TLNRD1
Talin rod domain containing 1.
    
 0.708
UTS2B
Urotensin 2B.
     
 0.654
CHDH
Choline dehydrogenase.
   
  
 0.580
KCNG1
BTB domain-containing protein.
   
 
 0.563
MESD
Mesoderm development LRP chaperone.
    
 
 0.546
CALCA
Calcitonin related polypeptide alpha.
   
  
 0.531
PRDM12
PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily.
   
 
 0.528
LOC100346323
Uncharacterized protein.
   
 0.500
GPR65
G protein-coupled receptor 65; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.451
PROB1
Proline rich basic protein 1.
    
 0.418
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.