STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS10Pseudouridine synthase 10. (510 aa)    
Predicted Functional Partners:
PUS1
Pseudouridine synthase 1.
   
  
 0.798
PUS7
Pseudouridine synthase 7.
   
  
 0.787
ABITRAM
Actin binding transcription modulator.
   
   0.772
PUS3
Pseudouridine synthase 3.
   
  
 0.772
DUS2
Dihydrouridine synthase 2.
   
  
 0.730
LOC100354908
Flavodoxin-like domain-containing protein.
   
  
 0.663
TRMT5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
  
 0.661
PUS7L
Pseudouridine synthase 7 like.
   
  
 0.654
THUMPD2
THUMP domain containing 2.
   
  
 0.636
DKC1
Dyskerin pseudouridine synthase 1.
   
  
 0.605
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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