STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA6DSemaphorin 6D; Belongs to the semaphorin family. (1086 aa)    
Predicted Functional Partners:
PLXNA1
Plexin A1.
    
 0.997
SEMA6C
Sema domain-containing protein; Belongs to the semaphorin family.
     
0.909
SEMA6A
Semaphorin 6A; Belongs to the semaphorin family.
  
  
0.909
PLXNA2
Plexin A2.
    
0.816
PLXNA4
Plexin A4.
    
0.806
NRCAM
Neuronal cell adhesion molecule.
   
 0.780
PLXNA3
Sema domain-containing protein.
    
0.768
PLXND1
Plexin D1.
    
 0.761
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.741
LOC100348748
IGv domain-containing protein.
     
 0.727
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.