STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf47Chromosome 6 open reading frame 47. (281 aa)    
Predicted Functional Partners:
C1orf35
Chromosome 1 open reading frame 35.
      
 0.696
FAM163A
Family with sequence similarity 163 member A.
      
 0.696
CACFD1
Calcium channel flower domain containing 1.
      
 0.680
NCR3
Ig-like domain-containing protein.
      
 0.676
KLHDC3
Kelch domain containing 3.
      
 0.649
KLHDC2
Kelch domain containing 2.
      
 0.648
RETREG3
Reticulophagy regulator family member 3.
   
  
 0.601
SESTD1
SEC14 and spectrin domain containing 1.
      
 0.593
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.593
PRRG1
Proline rich and Gla domain 1.
      
 0.591
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.