STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX1Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
SUV39H1
Suppressor of variegation 3-9 homolog 1.
   
 0.801
TRIM28
Tripartite motif containing 28.
    
 0.783
POGZ
Pogo transposable element derived with ZNF domain.
   
 
 0.725
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.678
SGO1
Shugoshin 1.
    
 
 0.673
CBX5
Chromobox 5.
  
 
 
0.664
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.661
PDCD11
Programmed cell death 11.
      
 0.658
CBX7
Chromobox 7.
    
 
 0.642
PCGF6
Polycomb group ring finger 6.
   
 0.635
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.