STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR42E2Short chain dehydrogenase/reductase family 42E, member 2. (422 aa)    
Predicted Functional Partners:
CRAMP1
Cramped chromatin regulator homolog 1.
      
 0.819
NDUFAF2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
      
 0.734
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
      
 0.712
UNC45B
Unc-45 myosin chaperone B.
      
 0.706
LMOD3
Leiomodin 3.
   
  
 0.677
MCMDC2
Minichromosome maintenance domain containing 2.
   
  
 0.569
HRH2
Histamine receptor H2; Belongs to the G-protein coupled receptor 1 family.
      
 0.543
RASL10B
RAS like family 10 member B.
      
 0.476
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.