STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CST3Cystatin-C; This is a thiol proteinase inhibitor; Belongs to the cystatin family. (420 aa)    
Predicted Functional Partners:
CTSS
Cathepsin S; Belongs to the peptidase C1 family.
   
 0.786
LGMN
Legumain.
    
 
 0.777
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 0.760
LOC100347623
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.722
LOC100356256
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.722
LOC100344030
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.722
CTSV
Cathepsin V; Belongs to the peptidase C1 family.
   
 0.721
RANGAP1
Ran GTPase activating protein 1.
   
 
 0.644
CLU
Clusterin alpha chain; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. Inhibits formation of amyloid fibrils by APP, APOC2, B2M, CALCA, CSN3, SNCA and aggregation-prone LYZ variants (in vitro). Does not require ATP. Maintains partially unfolded proteins in a state appropriate for subsequent refolding by other chaperones, such as HSPA8/HSC70. Does not refold proteins by itself. Binding to cell surface receptors triggers internalization of the chaperone-client complex and subsequent lysos [...]
   
  
 0.603
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 
 0.601
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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