STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDL3Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family. (306 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.760
RHBDD3
Rhomboid domain containing 3.
      
 0.748
CAPN12
Calpain 12; Belongs to the peptidase C2 family.
   
 
 0.724
RHBDD1
Rhomboid domain containing 1.
      
 0.706
RHBDF1
Rhomboid 5 homolog 1.
    
 
 0.675
RIT2
Ras-like GTP binding protein.
   
 0.660
PSMB11
Proteasome subunit beta.
   
 
 0.657
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
  
 0.645
LRGUK
Guanylate kinase-like domain-containing protein.
  
 0.643
PARL
Rhomboid domain-containing protein.
      
 0.621
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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