STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC136Coiled-coil domain containing 136. (1387 aa)    
Predicted Functional Partners:
FAM71B
DUF3699 domain-containing protein.
  
   
 0.786
ZNF385D
Zinc finger protein 385D.
    
 0.744
PROCA1
Protein interacting with cyclin A1.
    
 0.699
FAM205A
Family with sequence similarity 205 member A.
      
 0.698
LOC103350869
Uncharacterized protein.
      
 0.695
SPATA17
Spermatogenesis associated 17.
   
 0.648
SPATA18
Spermatogenesis associated 18.
      
 0.648
ALMS1
ALMS1 centrosome and basal body associated protein.
  
 
 0.642
SPATA3
Spermatogenesis associated 3.
    
 
 0.635
LOC100340374
Uncharacterized protein.
  
  
 0.615
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.