STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP6GTP binding protein 6 (putative). (514 aa)    
Predicted Functional Partners:
MRPL58
RF_PROK_I domain-containing protein.
    
 
 0.949
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
 
 0.949
MRPL19
Mitochondrial ribosomal protein L19.
  
 
 0.941
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.936
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.928
MRPL33
Mitochondrial ribosomal protein L33.
    
   0.928
GTPBP8
GTP binding protein 8 (putative).
  
  
 0.918
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.904
GTPBP10
GTP binding protein 10.
  
  
 0.891
TRIT1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
  
  
 0.871
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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