STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK1BTetraspanin. (260 aa)    
Predicted Functional Partners:
UPK2
Uncharacterized protein.
  
 
 0.943
UPK3A
Uroplakin 3A.
   
 
 0.926
UPK3B
Uroplakin 3B.
   
  
 0.913
GPM6A
Glycoprotein M6A.
   
  
 0.679
BNC1
Basonuclin 1.
   
  
 0.670
LOC100346670
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
  
  
0.647
GSAP
Gamma-secretase activating protein.
   
  
 0.602
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.542
TBX18
T-box transcription factor 18.
   
  
 0.540
PRR15
Proline rich 15.
      
 0.523
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.