STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM215Transmembrane protein 215. (235 aa)    
Predicted Functional Partners:
PRDM8
Uncharacterized protein.
      
 0.646
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.605
CNPY1
DUF3456 domain-containing protein.
      
 0.536
LRTM1
Leucine rich repeats and transmembrane domains 1.
      
 0.526
TBX19
T-box transcription factor 19.
      
 0.489
VSX2
Visual system homeobox 2.
   
  
 0.482
THAP2
THAP domain containing 2.
  
     0.468
SAMSN1
SAM domain, SH3 domain and nuclear localization signals 1.
   
  
 0.467
PDE6H
Phosphodiesterase 6H.
   
  
 0.457
PLXDC1
Plexin domain containing 1.
      
 0.446
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.