Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTLA | CD40 | ENSOCUP00000047910 | ENSOCUP00000034264 | Uncharacterized protein. | Uncharacterized protein. | 0.822 |
BTLA | CD40LG | ENSOCUP00000047910 | ENSOCUP00000003395 | Uncharacterized protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.602 |
BTLA | LTBR | ENSOCUP00000047910 | ENSOCUP00000001114 | Uncharacterized protein. | Lymphotoxin beta receptor. | 0.722 |
BTLA | TNFRSF11B | ENSOCUP00000047910 | ENSOCUP00000009595 | Uncharacterized protein. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.670 |
BTLA | TNFRSF8 | ENSOCUP00000047910 | ENSOCUP00000013688 | Uncharacterized protein. | TNF receptor superfamily member 8. | 0.419 |
BTLA | TNFSF14 | ENSOCUP00000047910 | ENSOCUP00000046009 | Uncharacterized protein. | TNF superfamily member 14. | 0.728 |
CD40 | BTLA | ENSOCUP00000034264 | ENSOCUP00000047910 | Uncharacterized protein. | Uncharacterized protein. | 0.822 |
CD40 | CD40LG | ENSOCUP00000034264 | ENSOCUP00000003395 | Uncharacterized protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.999 |
CD40 | TNFRSF8 | ENSOCUP00000034264 | ENSOCUP00000013688 | Uncharacterized protein. | TNF receptor superfamily member 8. | 0.484 |
CD40 | TNFSF14 | ENSOCUP00000034264 | ENSOCUP00000046009 | Uncharacterized protein. | TNF superfamily member 14. | 0.762 |
CD40 | TNLG7A | ENSOCUP00000034264 | ENSOCUP00000010562 | Uncharacterized protein. | Tumor necrosis factor ligand 7A; Belongs to the tumor necrosis factor family. | 0.871 |
CD40 | TRAF3 | ENSOCUP00000034264 | ENSOCUP00000003184 | Uncharacterized protein. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.992 |
CD40LG | BTLA | ENSOCUP00000003395 | ENSOCUP00000047910 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Uncharacterized protein. | 0.602 |
CD40LG | CD40 | ENSOCUP00000003395 | ENSOCUP00000034264 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Uncharacterized protein. | 0.999 |
CD40LG | LTBR | ENSOCUP00000003395 | ENSOCUP00000001114 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Lymphotoxin beta receptor. | 0.845 |
CD40LG | TNFRSF11B | ENSOCUP00000003395 | ENSOCUP00000009595 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.690 |
CD40LG | TNFRSF1B | ENSOCUP00000003395 | ENSOCUP00000012146 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF receptor superfamily member 1B. | 0.619 |
CD40LG | TNFRSF8 | ENSOCUP00000003395 | ENSOCUP00000013688 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF receptor superfamily member 8. | 0.699 |
CD40LG | TNFSF13 | ENSOCUP00000003395 | ENSOCUP00000019439 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. | 0.417 |
CD40LG | TNFSF14 | ENSOCUP00000003395 | ENSOCUP00000046009 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF superfamily member 14. | 0.651 |
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