STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSIG10V-set and immunoglobulin domain containing 10. (541 aa)    
Predicted Functional Partners:
TTC17
Tetratricopeptide repeat domain 17.
      
 0.772
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family.
      
 0.703
GLYATL3
Glycine-N-acyltransferase like 3.
      
 0.698
FAM174A
Family with sequence similarity 174 member A.
      
 0.696
LYPLAL1
Lysophospholipase like 1.
      
 0.664
HEATR5B
HEAT repeat containing 5B.
      
 0.655
MCOLN2
Mucolipin 2.
    
 
 0.645
SNTN
Sentan, cilia apical structure protein.
      
 0.637
STBD1
CBM20 domain-containing protein.
     
 0.636
POLR3D
RNA polymerase III subunit D.
      
 0.633
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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