STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L5Erythrocyte membrane protein band 4.1 like 5. (731 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.947
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
      
 0.569
LRRC40
Leucine rich repeat containing 40.
      
 0.565
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
 
  
 0.538
BCAP29
Uncharacterized protein.
      
 0.530
LLGL1
LLGL scribble cell polarity complex component 1.
   
 
 0.526
LOC100344388
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.509
SHROOM1
Uncharacterized protein.
      
 0.506
EPB41
Erythrocyte membrane protein band 4.1.
     
0.505
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
   
 0.495
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.