ATF7IP2 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ATF7IP2

Activating transcription factor 7 interacting protein 2. (685 aa)

Predicted Functional Partners:

SETDB1

0.909

SETDB2

0.851

ARL14EP

0.727

TCEAL1

0.678

CDYL

0.641

MASTL

0.582

CDKN3

0.560

C1QC

0.498

ATF7IP

0.471

DNAJA4

0.469

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL14EP	ATF7IP	ENSOCUP00000028273	ENSOCUP00000010643	ADP ribosylation factor like GTPase 14 effector protein.	Activating transcription factor 7 interacting protein.	0.964
ARL14EP	ATF7IP2	ENSOCUP00000028273	ENSOCUP00000007263	ADP ribosylation factor like GTPase 14 effector protein.	Activating transcription factor 7 interacting protein 2.	0.727
ARL14EP	SETDB1	ENSOCUP00000028273	ENSOCUP00000011002	ADP ribosylation factor like GTPase 14 effector protein.	SET domain bifurcated histone lysine methyltransferase 1.	0.961
ARL14EP	SETDB2	ENSOCUP00000028273	ENSOCUP00000021600	ADP ribosylation factor like GTPase 14 effector protein.	SET domain bifurcated histone lysine methyltransferase 2.	0.951
ATF7IP	ARL14EP	ENSOCUP00000010643	ENSOCUP00000028273	Activating transcription factor 7 interacting protein.	ADP ribosylation factor like GTPase 14 effector protein.	0.964
ATF7IP	ATF7IP2	ENSOCUP00000010643	ENSOCUP00000007263	Activating transcription factor 7 interacting protein.	Activating transcription factor 7 interacting protein 2.	0.471
ATF7IP	C1QC	ENSOCUP00000010643	ENSOCUP00000013007	Activating transcription factor 7 interacting protein.	Complement C1q C chain.	0.546
ATF7IP	SETDB1	ENSOCUP00000010643	ENSOCUP00000011002	Activating transcription factor 7 interacting protein.	SET domain bifurcated histone lysine methyltransferase 1.	0.986
ATF7IP	SETDB2	ENSOCUP00000010643	ENSOCUP00000021600	Activating transcription factor 7 interacting protein.	SET domain bifurcated histone lysine methyltransferase 2.	0.884
ATF7IP2	ARL14EP	ENSOCUP00000007263	ENSOCUP00000028273	Activating transcription factor 7 interacting protein 2.	ADP ribosylation factor like GTPase 14 effector protein.	0.727
ATF7IP2	ATF7IP	ENSOCUP00000007263	ENSOCUP00000010643	Activating transcription factor 7 interacting protein 2.	Activating transcription factor 7 interacting protein.	0.471
ATF7IP2	C1QC	ENSOCUP00000007263	ENSOCUP00000013007	Activating transcription factor 7 interacting protein 2.	Complement C1q C chain.	0.498
ATF7IP2	CDKN3	ENSOCUP00000007263	ENSOCUP00000043729	Activating transcription factor 7 interacting protein 2.	Cyclin dependent kinase inhibitor 3.	0.560
ATF7IP2	CDYL	ENSOCUP00000007263	ENSOCUP00000036179	Activating transcription factor 7 interacting protein 2.	Chromodomain Y like.	0.641
ATF7IP2	DNAJA4	ENSOCUP00000007263	ENSOCUP00000032838	Activating transcription factor 7 interacting protein 2.	DnaJ heat shock protein family (Hsp40) member A4.	0.469
ATF7IP2	MASTL	ENSOCUP00000007263	ENSOCUP00000043850	Activating transcription factor 7 interacting protein 2.	Microtubule associated serine/threonine kinase like.	0.582
ATF7IP2	SETDB1	ENSOCUP00000007263	ENSOCUP00000011002	Activating transcription factor 7 interacting protein 2.	SET domain bifurcated histone lysine methyltransferase 1.	0.909
ATF7IP2	SETDB2	ENSOCUP00000007263	ENSOCUP00000021600	Activating transcription factor 7 interacting protein 2.	SET domain bifurcated histone lysine methyltransferase 2.	0.851
ATF7IP2	TCEAL1	ENSOCUP00000007263	ENSOCUP00000000475	Activating transcription factor 7 interacting protein 2.	Transcription elongation factor A like 1.	0.678
C1QC	ATF7IP	ENSOCUP00000013007	ENSOCUP00000010643	Complement C1q C chain.	Activating transcription factor 7 interacting protein.	0.546