STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A6OSSolute carrier family 7 member 6 opposite strand. (309 aa)    
Predicted Functional Partners:
POLR2C
RNA polymerase II subunit C.
   
 
 0.868
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.787
EAPP
E2F associated phosphoprotein.
    
 
 0.777
POLR2J
RNA polymerase II subunit J.
    
 
 0.774
TANGO6
Uncharacterized protein.
   
 
 0.756
NCDN
Neurochondrin.
      
 0.735
POLR2L
Uncharacterized protein.
    
 
 0.704
ZNHIT6
Zinc finger HIT-type containing 6.
   
  
 0.701
TTI2
TELO2 interacting protein 2.
   
  
 0.700
POLR1C
RNA polymerase I and III subunit C.
   
 
 0.693
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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