STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1MPPM-type phosphatase domain-containing protein. (459 aa)    
Predicted Functional Partners:
PUDP
Pseudouridine 5'-phosphatase.
      
 0.700
PTPRU
Protein tyrosine phosphatase receptor type U.
   
  
 0.698
PLPP6
Phospholipid phosphatase 6.
      
 0.680
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.654
DUSP18
Dual specificity phosphatase 18; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.650
RILP
Rab interacting lysosomal protein.
      
 0.631
MTMR9
Myotubularin related protein 9.
      
 0.631
RAB29
RAB29, member RAS oncogene family.
    
 
 0.622
NT5DC2
5'-nucleotidase domain containing 2.
      
 0.613
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
      
 0.599
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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