RBPMS protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RBPMS

RNA binding protein, mRNA processing factor. (219 aa)

Predicted Functional Partners:

QKI

0.843

RBFOX2

0.773

RBFOX1

0.653

THY1

0.591

CALB1

0.590

SNCG

0.569

GLUL

0.526

ESRP1

0.524

RCVRN

0.519

RBM24

0.517

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALB1	GLUL	ENSOCUP00000005484	ENSOCUP00000007630	Cerebellar calbindin.	Glutamine synthetase.	0.684
CALB1	RBPMS	ENSOCUP00000005484	ENSOCUP00000007406	Cerebellar calbindin.	RNA binding protein, mRNA processing factor.	0.590
CALB1	RCVRN	ENSOCUP00000005484	ENSOCUP00000013316	Cerebellar calbindin.	Recoverin.	0.815
CALB1	SNCG	ENSOCUP00000005484	ENSOCUP00000011436	Cerebellar calbindin.	Gamma-synuclein; Belongs to the synuclein family.	0.448
CALB1	THY1	ENSOCUP00000005484	ENSOCUP00000006698	Cerebellar calbindin.	Thy-1 cell surface antigen.	0.526
ESRP1	QKI	ENSOCUP00000001135	ENSOCUP00000003564	Epithelial splicing regulatory protein 1.	QKI, KH domain containing RNA binding.	0.610
ESRP1	RBFOX2	ENSOCUP00000001135	ENSOCUP00000043588	Epithelial splicing regulatory protein 1.	RNA binding fox-1 homolog 2.	0.702
ESRP1	RBPMS	ENSOCUP00000001135	ENSOCUP00000007406	Epithelial splicing regulatory protein 1.	RNA binding protein, mRNA processing factor.	0.524
GLUL	CALB1	ENSOCUP00000007630	ENSOCUP00000005484	Glutamine synthetase.	Cerebellar calbindin.	0.684
GLUL	RBPMS	ENSOCUP00000007630	ENSOCUP00000007406	Glutamine synthetase.	RNA binding protein, mRNA processing factor.	0.526
GLUL	RCVRN	ENSOCUP00000007630	ENSOCUP00000013316	Glutamine synthetase.	Recoverin.	0.717
QKI	ESRP1	ENSOCUP00000003564	ENSOCUP00000001135	QKI, KH domain containing RNA binding.	Epithelial splicing regulatory protein 1.	0.610
QKI	RBFOX1	ENSOCUP00000003564	ENSOCUP00000001045	QKI, KH domain containing RNA binding.	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	0.754
QKI	RBFOX2	ENSOCUP00000003564	ENSOCUP00000043588	QKI, KH domain containing RNA binding.	RNA binding fox-1 homolog 2.	0.874
QKI	RBPMS	ENSOCUP00000003564	ENSOCUP00000007406	QKI, KH domain containing RNA binding.	RNA binding protein, mRNA processing factor.	0.843
RBFOX1	QKI	ENSOCUP00000001045	ENSOCUP00000003564	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing RNA binding.	0.754
RBFOX1	RBM24	ENSOCUP00000001045	ENSOCUP00000029468	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	RNA binding motif protein 24.	0.793
RBFOX1	RBPMS	ENSOCUP00000001045	ENSOCUP00000007406	RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor.	0.653
RBFOX2	ESRP1	ENSOCUP00000043588	ENSOCUP00000001135	RNA binding fox-1 homolog 2.	Epithelial splicing regulatory protein 1.	0.702
RBFOX2	QKI	ENSOCUP00000043588	ENSOCUP00000003564	RNA binding fox-1 homolog 2.	QKI, KH domain containing RNA binding.	0.874