STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD28Ankyrin repeat domain 28. (1082 aa)    
Predicted Functional Partners:
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
   
 0.907
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
   
 0.880
PPP6C
Serine/threonine-protein phosphatase.
   
 0.869
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.859
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
    
 0.679
LRCH4
Leucine rich repeats and calponin homology domain containing 4.
    
 0.627
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
    
 0.622
RPP40
Ribonuclease P/MRP subunit p40.
   
 0.608
FAM43A
Family with sequence similarity 43 member A.
      
 0.600
ZNRF2
RING-type domain-containing protein.
    
 
 0.572
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.