Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF23BHLH domain-containing protein. (377 aa)    
Predicted Functional Partners:
CCDC116
Uncharacterized protein.
   
  
 0.706
TCF12
Transcription factor 12.
    
 0.632
TCF4
Transcription factor 4.
    
 0.632
FIGLA
Folliculogenesis specific bHLH transcription factor.
    
 
 0.611
EFCAB5
EF-hand calcium binding domain 5.
      
 0.591
FAM78A
Family with sequence similarity 78 member A.
      
 0.554
GJD4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.545
PHYHIP
Phytanoyl-CoA 2-hydroxylase interacting protein.
   
  
 0.533
LRRC52
Leucine rich repeat containing 52.
      
 0.530
SLC26A10
Solute carrier family 26 member 10.
      
 0.517
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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