Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100349257GB1/RHD3-type G domain-containing protein. (624 aa)    
Predicted Functional Partners:
GBP1
Guanylate binding protein 1.
  
0.888
ACSM1
Acyl-CoA synthetase medium chain family member 1.
    
   0.758
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
   
 
 0.715
STAT1
Signal transducer and activator of transcription.
   
 0.604
LOC100349005
GB1/RHD3-type G domain-containing protein.
   
  0.575
LOC100346467
GB1/RHD3-type G domain-containing protein.
   
  0.575
ENSOCUP00000039931
GB1/RHD3-type G domain-containing protein.
   
  0.575
CASP1
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.522
LOC100358658
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.521
PGGT1B
Protein geranylgeranyltransferase type I subunit beta.
     
  0.519
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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