STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100349257GB1/RHD3-type G domain-containing protein. (624 aa)    
Predicted Functional Partners:
LOC100346209
GB1/RHD3-type G domain-containing protein.
  
  
 
0.901
STAT1
Signal transducer and activator of transcription.
   
 
 0.594
MARCHF8
Membrane associated ring-CH-type finger 8.
      
 0.497
CXCL9
C-X-C motif chemokine.
   
  
 0.469
SLAMF8
SLAM family member 8.
   
  
 0.466
GBP1
Guanylate binding protein 1.
  
 
0.452
CXCL10
C-X-C motif chemokine.
   
  
 0.446
MRPL55
Mitochondrial ribosomal protein L55.
      
 0.445
ACSM1
Acyl-CoA synthetase medium chain family member 1.
    
   0.439
BATF2
Basic leucine zipper ATF-like transcription factor 2.
   
  
 0.435
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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