STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1LRAB GTPase activating protein 1 like. (814 aa)    
Predicted Functional Partners:
TTC6
TPR_REGION domain-containing protein.
   
  
 0.706
TBCC
C-CAP/cofactor C-like domain-containing protein.
   
  
 0.702
TBC1D22A
Uncharacterized protein.
    
 
 0.611
ALS2CL
ALS2 C-terminal like.
      
 0.601
RAB6A
RAB6A, member RAS oncogene family.
   
 0.597
RAB22A
RAB22A, member RAS oncogene family.
   
 0.593
RAB6B
RAB6B, member RAS oncogene family.
   
 0.593
LYSMD2
LysM domain-containing protein.
      
 0.568
TNFAIP8L3
TNF alpha induced protein 8 like 3.
   
  
 0.529
RABGEF1
Uncharacterized protein.
   
  0.529
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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