STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM69Tripartite motif containing 69. (500 aa)    
Predicted Functional Partners:
TRIM42
Tripartite motif containing 42.
      
 0.773
MAGEB10
MAGE family member B10.
   
 
 0.704
SPACA9
Sperm acrosome associated 9.
   
  
 0.700
C2CD6
Uncharacterized protein.
      
 0.650
EFCAB9
EF-hand calcium binding domain 9.
      
 0.649
TRIM66
Tripartite motif containing 66.
      
 0.561
TRIM23
Tripartite motif containing 23.
    
 0.547
ABTB2
Ankyrin repeat and BTB domain containing 2.
    
 
 0.543
TRIM47
Tripartite motif containing 47.
      
 0.534
TRIM33
Tripartite motif containing 33.
    
 
 0.526
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.