STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZGPATG-patch domain-containing protein. (301 aa)    
Predicted Functional Partners:
DCAF8
DDB1 and CUL4 associated factor 8.
      
 0.716
PRPF3
Pre-mRNA processing factor 3.
   
   0.702
GPATCH1
G-patch domain containing 1.
   
  
 0.664
WDR13
WD repeat domain 13.
   
 
 0.651
FAM53B
Family with sequence similarity 53 member B.
      
 0.649
ZNF444
Zinc finger protein 444.
      
 0.649
ZMYM6
Zinc finger MYM-type containing 6.
   
  
 0.618
ZNF512B
Zinc finger protein 512B.
      
 0.608
DHX35
DEAH-box helicase 35.
   
 
 0.600
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.587
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.