Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZGPATG-patch domain-containing protein. (301 aa)    
Predicted Functional Partners:
PRPF3
Pre-mRNA processing factor 3.
   
   0.838
DHX15
DEAH-box helicase 15.
   
 
 0.816
PRPF4
Pre-mRNA processing factor 4.
   
   0.795
TERF2
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
   
 
 0.685
GPKOW
G-patch domain and KOW motifs.
      
 0.627
PHF13
PHD finger protein 13.
      
 0.622
KIAA1328
KIAA1328.
    
   0.621
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.613
HEXD
Glyco_hydro_20 domain-containing protein.
   
  
 0.612
DCAF8
DDB1 and CUL4 associated factor 8.
      
 0.610
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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