STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD7Sterile alpha motif domain containing 7. (448 aa)    
Predicted Functional Partners:
SAMD14
Sterile alpha motif domain containing 14.
      
 0.764
OPN1SW
Opsin 1, short wave sensitive.
   
 
 0.759
GPR160
G protein-coupled receptor 160.
      
 0.687
SMAD7
Mothers against decapentaplegic homolog.
      
 0.655
L3MBTL4
L3MBTL histone methyl-lysine binding protein 4.
   
  
 0.558
SCML4
SAM domain-containing protein.
   
  
 0.556
VEPH1
Ventricular zone expressed PH domain containing 1.
   
  
 0.545
CRX
Uncharacterized protein.
   
  
 0.498
NRL
Neural retina leucine zipper.
      
 0.483
ZNF408
Zinc finger protein 408.
   
  
 0.480
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.