STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN4Peptidyl-prolyl cis-trans isomerase. (128 aa)    
Predicted Functional Partners:
RNF44
RING-type domain-containing protein.
    
 
 0.765
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.659
C1orf50
Chromosome 1 open reading frame 50.
      
 0.650
KIN
Kin17 DNA and RNA binding protein.
 
      0.643
WDR48
WD repeat domain 48.
 
      0.586
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.574
TXNDC12
Thioredoxin domain containing 12.
   
 
 0.567
GPHN
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
  
 
 0.535
CLPP
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.523
SAMM50
SAMM50 sorting and assembly machinery component.
  
 
 0.519
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.