Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAIPTRAF interacting protein. (582 aa)    
Predicted Functional Partners:
LRR1
Leucine rich repeat protein 1.
   
  
 0.849
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.839
TRAF1
TNF receptor-associated factor.
    
 
 0.827
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.799
FANCD2
Uncharacterized protein.
   
 
 0.774
MAPRE2
Microtubule associated protein RP/EB family member 2.
    
   0.773
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.730
UBXN7
UBX domain-containing protein.
   
  
 0.701
RNF216
Ring finger protein 216.
   
  
 0.701
TBK1
TANK binding kinase 1.
    
 
 0.676
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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