STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DKKL1Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
SPATA19
Spermatogenesis associated 19.
   
  
 0.695
TRABD2B
TraB domain containing 2B.
      
 0.649
SHCBP1L
CASH domain-containing protein.
      
 0.611
DKK2
Dickkopf WNT signaling pathway inhibitor 2.
      
 0.603
TNK2
Tyrosine kinase non receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  
 0.603
DKK1
Dickkopf-like protein 1.
      
 0.554
CCDC155
Uncharacterized protein.
     
 0.512
PGBD1
PiggyBac transposable element derived 1.
     
 0.504
TNP2
Nuclear transition protein 2; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction.
   
  
 0.498
ADAD1
Uncharacterized protein.
      
 0.492
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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