STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUTS2Activator of transcription and developmental regulator AUTS2. (803 aa)    
Predicted Functional Partners:
PCGF5
Polycomb group ring finger 5.
   
 0.911
G1TMM4_RABIT
Uncharacterized protein.
 
      0.900
YAF2
YY1 associated factor 2.
    
 0.852
PCGF3
Polycomb group ring finger 3.
    
 0.772
RYBP
RING1 and YY1 binding protein.
    
 0.765
PCGF1
Polycomb group ring finger 1.
    
 0.694
CHEK2
Checkpoint kinase 2.
   
 0.660
G1U998_RABIT
Nucleolar protein 6.
      
 0.649
ENSOCUP00000039125
Nucleolar protein 6.
      
 0.649
PCGF6
Polycomb group ring finger 6.
    
 0.643
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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