STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2AUBX domain protein 2A. (260 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.990
UBXN8
UBX domain-containing protein.
    
 0.987
NSFL1C
NSFL1 cofactor.
    
0.982
UBXN1
UBX domain protein 1.
   
 0.980
UBXN7
UBX domain-containing protein.
    
 
 0.968
UBXN4
UBX domain protein 4.
    
 0.963
SVIP
Uncharacterized protein.
     
 0.959
ENSOCUP00000034343
Uncharacterized protein.
    
 
 0.850
VCPIP1
Valosin containing protein interacting protein 1.
   
 
 0.823
LACTB
Lactamase beta.
    
  0.823
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.