Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C9orf135Chromosome 9 open reading frame 135. (231 aa)    
Predicted Functional Partners:
SPAG8
Sperm associated antigen 8.
   
   0.811
EFHB
EF-hand domain family member B.
   
   0.811
RIBC2
RIB43A domain with coiled-coils 2.
   
   0.809
TEKT3
Uncharacterized protein.
   
   0.803
CCDC105
Coiled-coil domain containing 105.
   
   0.802
TEKT1
Tektin 1.
   
 
 0.800
TEX49
Testis expressed 49.
  
 
   0.799
C5orf49
Chromosome 5 open reading frame 49.
   
   0.799
EFHC2
EF-hand domain containing 2.
   
   0.797
TEKT2
Tektin 2.
   
   0.794
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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