STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100344160RRM domain-containing protein. (306 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1.
   
 
 0.710
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.696
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
0.613
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.613
ILF2
Interleukin enhancer binding factor 2.
   
 
 0.612
HNRNPL
Heterogeneous nuclear ribonucleoprotein L; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.605
SLC25A2
Solute carrier family 25 member 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.600
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.596
TRA2B
Transformer 2 beta homolog.
   
 0.588
SRSF7
CCHC-type domain-containing protein.
   
 0.579
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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