STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNRC1Proline rich nuclear receptor coactivator 1. (327 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
   
 0.778
UBE3D
Ubiquitin protein ligase E3D.
      
 0.653
LSM14B
LSM family member 14B.
      
 0.552
TRIM5
Uncharacterized protein.
   
  
 0.547
RNF115
RING-type domain-containing protein.
      
 0.546
MICOS10
MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
   
  
 0.542
SPATA5
Spermatogenesis associated 5.
      
 0.541
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
      
 0.540
FCF1
PINc domain-containing protein.
      
 0.539
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
      
 0.534
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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