STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFXL1Nuclear transcription factor, X-box binding like 1. (909 aa)    
Predicted Functional Partners:
DNAAF4
Dynein axonemal assembly factor 4.
   
 
 0.699
ZBTB41
Zinc finger and BTB domain containing 41.
   
  
 0.651
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
      
 0.623
ZNF420
Zinc finger protein 420.
   
  
 0.603
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 
 0.601
ENSOCUP00000040426
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.600
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.596
ENSOCUP00000006516
Peptidyl-prolyl cis-trans isomerase FKBP3.
   
 
 0.591
FKBP1B
Peptidyl-prolyl cis-trans isomerase FKBP1B; Has the potential to contribute to the immunosuppressive and toxic effects of FK506 and rapamycin. PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
   
 
 0.591
FKBP3
Peptidyl-prolyl cis-trans isomerase FKBP3; FK506- and rapamycin-binding proteins (FKBPs) constitute a family of receptors for the two immunosuppressants which inhibit T-cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. PPIases accelerate the folding of proteins (By similarity).
   
 
 0.591
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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