STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD1Bromodomain and WD repeat domain containing 1. (2220 aa)    
Predicted Functional Partners:
URB1
URB1 ribosome biogenesis homolog.
   
 
 0.701
CRYZL1
Crystallin zeta like 1.
      
 0.675
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.669
DOP1B
DOP1 leucine zipper like protein B.
   
  
 0.655
PNISR
PNN interacting serine and arginine rich protein.
   
 0.645
FEM1C
Fem-1 homolog C.
    
 0.639
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
   
 0.637
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.624
TAF1
Transcription initiation factor TFIID subunit.
   
0.618
TSSK6
Testis specific serine kinase 6; Belongs to the protein kinase superfamily.
   
 
 0.612
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (56%) [HD]