STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EBF3EBF transcription factor 3. (520 aa)    
Predicted Functional Partners:
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.614
YOD1
YOD1 deubiquitinase.
   
   0.587
PLAA
Phospholipase A2 activating protein.
    
 
 0.586
TBX1
Uncharacterized protein.
   
  
 0.557
FBXO31
F-box protein 31.
      
 0.540
LOC100349682
Ig-like domain-containing protein.
      
 0.540
LHX2
LIM homeobox 2.
   
 
 0.474
ZNF521
Zinc finger protein 521.
   
 
 0.470
PAX5
Paired box 5.
   
  
 0.463
DAPP1
Dual adaptor of phosphotyrosine and 3-phosphoinositides 1.
     
 0.453
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.