Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EBF3EBF transcription factor 3. (520 aa)    
Predicted Functional Partners:
EBF2
EBF transcription factor 2.
   
   0.729
ZNF521
Zinc finger protein 521.
   
 0.581
LHX2
LIM homeobox 2.
   
 
 0.531
LOC100349682
Ig-like domain-containing protein.
      
 0.510
PAX5
Paired box 5.
   
 
 0.507
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.484
ENSOCUP00000027896
Uncharacterized protein; Belongs to the GST superfamily.
    
   0.481
EEF1G
Elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components.
    
   0.481
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
     
 0.468
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.450
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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