STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNPO2Synaptopodin 2. (1259 aa)    
Predicted Functional Partners:
BAG3
BCL2 associated athanogene 3.
    
 
 0.685
HSPB8
Heat shock protein family B (small) member 8; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.632
PARVA
Parvin alpha.
   
 0.598
OCIAD2
OCIA domain containing 2.
      
 0.598
FLNC
Filamin C.
   
 
 0.580
ARFIP1
ADP ribosylation factor interacting protein 1.
    
 
 0.578
FILIP1
Filamin A interacting protein 1.
   
 
 0.570
CCDC189
Uncharacterized protein.
      
 0.541
PDZD9
PDZ domain containing 9.
      
 0.540
SPEG
Ig-like domain-containing protein.
   
 0.524
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.