STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD10Homeobox domain-containing protein. (410 aa)    
Predicted Functional Partners:
HOXD9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
  
0.731
RHOC
Uncharacterized protein.
      
 0.655
COL2A1
Fibrillar collagen NC1 domain-containing protein.
   
  
 0.630
HOXB8
Homeobox B8.
   
 
 0.616
PBX1
PBX homeobox 1.
   
 
 0.606
HOXA10
Homeobox A10.
   
 
0.564
HOXA11
Homeobox A11 (Predicted).
   
  
0.561
HOXD13
Homeobox D13.
   
  
0.553
HOXD3
Homeobox D3.
   
 
0.547
TBX1
Uncharacterized protein.
    
 
 0.533
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.