Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LETMD1LETM1 domain containing 1. (357 aa)    
Predicted Functional Partners:
VWCE
Von Willebrand factor C and EGF domains.
      
 0.730
LMBR1
Limb development membrane protein 1; Belongs to the LIMR family.
    
 
 0.689
FAM189B
Family with sequence similarity 189 member B.
      
 0.672
PDXK
Pyridoxal kinase.
      
 0.621
CSAD
Cysteine sulfinic acid decarboxylase.
      
 0.610
ENDOV
Uncharacterized protein.
      
 0.573
TMEM43
Transmembrane protein 43.
    
   0.568
NOVA1
NOVA alternative splicing regulator 1.
   
  
 0.544
TFAP2E
Transcription factor AP-2 epsilon.
      
 0.530
PANK1
Pantothenate kinase 1.
   
  
 0.516
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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