Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKX3-2NK3 homeobox 2. (333 aa)    
Predicted Functional Partners:
MOSPD1
Motile sperm domain containing 1.
      
 0.630
PAX1
Paired box 1.
   
 
 0.606
PAX9
Paired box 9.
    
 
 0.561
FOXF2
Forkhead box F2.
   
 0.519
TCF21
Transcription factor 21.
    
 0.512
HOXC8
Homeobox C8.
   
 
0.482
GTF2A1L
Uncharacterized protein.
      
 0.479
SOX9
SRY-box transcription factor 9.
   
 
 0.473
HAND2
BHLH domain-containing protein.
    
 0.469
RUNX2
RUNX family transcription factor 2.
   
 0.467
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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