STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAI14Retinoic acid induced 14. (978 aa)    
Predicted Functional Partners:
TMOD3
Uncharacterized protein.
     
 0.657
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.625
DTWD2
DTW domain containing 2.
      
 0.591
KIF6
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.543
HOMER2
Homer scaffold protein 2.
    
 0.535
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.505
ARHGEF17
Rho guanine nucleotide exchange factor 17.
    
 
 0.496
DNAJC21
DnaJ heat shock protein family (Hsp40) member C21.
      
 0.486
ZNHIT1
Zinc finger HIT-type containing 1.
   
 
 0.485
RBM28
RNA binding motif protein 28.
   
 
 0.485
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.