Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G1SWM0_RABITUncharacterized protein. (211 aa)    
Predicted Functional Partners:
THOC3
THO complex 3.
   
 0.985
THOC1
THO complex 1.
   
 0.984
THOC2
THO complex 2.
   
 0.982
THOC5
THO complex 5.
   
 0.977
SARNP
SAP domain containing ribonucleoprotein.
   
 0.944
DDX39B
DExD-box helicase 39B.
   
 0.928
ZC3H11A
Uncharacterized protein.
    
 0.818
G1U968_RABIT
Uncharacterized protein.
   
 0.801
ENSOCUP00000045788
Uncharacterized protein.
   
 0.795
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.787
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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