Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DMTF1Cyclin D binding myb like transcription factor 1. (761 aa)    
Predicted Functional Partners:
CCDC59
Coiled-coil domain containing 59.
   
 
  0.778
ENSOCUP00000027550
Uncharacterized protein.
   
 
  0.778
TAF1
Transcription initiation factor TFIID subunit.
    
 0.720
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
 
 0.674
MED24
Mediator complex subunit 24.
      
 0.656
G1TEQ0_RABIT
Uncharacterized protein.
   
 
 0.654
LOC100358947
Uncharacterized protein.
   
 
 0.654
LOC100359118
Uncharacterized protein.
   
 
 0.654
POLR1C
RNA polymerase I and III subunit C.
    
 0.637
POLR1E
RNA polymerase I subunit E.
    
 0.606
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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