Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CETN1Centrin 1. (172 aa)    
Predicted Functional Partners:
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.938
POC5
POC5 centriolar protein.
   
 
 0.926
PLK1
Serine/threonine-protein kinase PLK.
    
 0.920
CEP164
Centrosomal protein 164.
    
 0.895
PLK4
Polo like kinase 4.
    
 0.889
PCNT
Pericentrin.
    
 0.886
SFI1
SFI1 centrin binding protein.
    
 0.865
NEDD1
NEDD1 gamma-tubulin ring complex targeting factor.
     
 0.850
CETN3
Centrin 3.
  
0.849
CEP135
Centrosomal protein 135.
    
 0.820
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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